Photo by Jeff White

Encinitas San Diego Botanic Garden Hotels

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Next weekend
In two weeks

Filter by

Guest rating
Guest rating
Star rating

Our top choices for San Diego Botanic Garden hotels

Moonlight Beach Motel

Moonlight Beach Motel
2.5 star property
Downtown Encinitas, 1.5 km from San Diego Botanic Garden
9.4 out of 10, Exceptional, (503)
"Great location, great staff"
United States
Joan
Moonlight Beach Motel

Leucadia Beach Inn

Leucadia Beach Inn
2.5 star property
Leucadia, 3 km from San Diego Botanic Garden
9.4 out of 10, Exceptional, (1004)
"Love this place!"
United States
BILL
The price is HK$693
HK$763 total
includes taxes & fees
8 Jan - 9 Jan 2026
Leucadia Beach Inn

Inn at Moonlight Beach

Inn at Moonlight Beach
3.5 star property
Downtown Encinitas, 1.2 km from San Diego Botanic Garden
9.6 out of 10, Exceptional, (122)
"We had a relaxing stay and enjoyed the peaceful vibes, pretty rooms and grounds, and all the special touches."
United States
lisa
The price is HK$2,158
HK$2,608 total
includes taxes & fees
6 Jan - 7 Jan 2026
Inn at Moonlight Beach

Hampton Inn Cardiff Beach Encinitas, CA

Hampton Inn Cardiff Beach Encinitas, CA
3.0 star property
2.9 km from San Diego Botanic Garden
9.2 out of 10, Wonderful, (1044)
"Clean room and staff were excellent."
United States
Jose
The price is HK$1,078
HK$1,186 total
includes taxes & fees
28 Dec - 29 Dec
Hampton Inn Cardiff Beach Encinitas, CA

Brisa Pacific Hotel Encinitas

Brisa Pacific Hotel Encinitas
2.0 star property
Downtown Encinitas, 1.7 km from San Diego Botanic Garden
8.8 out of 10, Excellent, (1001)
"Pleasant stay"
United States
charles
Brisa Pacific Hotel Encinitas

The Encinitan Hotel & Suites

The Encinitan Hotel & Suites
3.0 star property
Downtown Encinitas, 1.1 km from San Diego Botanic Garden
8.2 out of 10, Very good, (1290)
"Always a great stay!"
United States
Edith
The Encinitan Hotel & Suites

Days Inn by Wyndham Encinitas Moonlight Beach

Days Inn by Wyndham Encinitas Moonlight Beach
2.0 star property
Downtown Encinitas, 1 km from San Diego Botanic Garden
6.8 out of 10, (1139)
"Nice stay"
United States
Sharon
The price is HK$732
HK$809 total
includes taxes & fees
4 Jan - 5 Jan 2026
Days Inn by Wyndham Encinitas Moonlight Beach

Comfort Inn Encinitas Near Legoland

Comfort Inn Encinitas Near Legoland
2.5 star property
Leucadia, 1.6 km from San Diego Botanic Garden
6.8 out of 10, (1001)
"Good comfortable place to stay"
United States
Prasan
The price is HK$622
HK$685 total
includes taxes & fees
4 Jan - 5 Jan 2026
Comfort Inn Encinitas Near Legoland

Rodeway Inn Encinitas North

Rodeway Inn Encinitas North
2.0 star property
Leucadia, 3.2 km from San Diego Botanic Garden
7.4 out of 10, Good, (1003)
"Great place"
United States
Lourdes
The price is HK$473
HK$520 total
includes taxes & fees
29 Dec - 30 Dec
Rodeway Inn Encinitas North

Cardiff by the Sea Lodge

Cardiff by the Sea Lodge
3.0 star property
3.7 km from San Diego Botanic Garden
8.6 out of 10, Excellent, (728)
"Very good "
United States
Yana
The price is HK$1,289
HK$1,420 total
includes taxes & fees
22 Dec - 23 Dec
Cardiff by the Sea Lodge

Fairfield Inn & Suites San Diego Carlsbad

Fairfield Inn & Suites San Diego Carlsbad
2.5 star property
7.4 km from San Diego Botanic Garden
9.0 out of 10, Wonderful, (1001)
"Clean room, quiet and the breakfast was good. Short drive to legoland"
Canada
Scott
The price is HK$820
HK$928 total
includes taxes & fees
30 Dec - 31 Dec
Fairfield Inn & Suites San Diego Carlsbad

Park Hyatt Aviara Resort, Golf Club & Spa

Park Hyatt Aviara Resort, Golf Club & Spa
5.0 star property
5.6 km from San Diego Botanic Garden
9.4 out of 10, Exceptional, (1001)
"Excellent hotel. Staff is freindly. Valet was better than most places."
United States
David
The price is HK$3,805
HK$4,821 total
includes taxes & fees
3 Jan - 4 Jan 2026
Park Hyatt Aviara Resort, Golf Club & Spa

Four Seasons Residence Club Aviara, North San Diego

Four Seasons Residence Club Aviara, North San Diego
5.0 star property
5.1 km from San Diego Botanic Garden
9.4 out of 10, Exceptional, (389)
"Beautiful hotel and excellent service "
United States
Shawn
The price is HK$3,307
HK$4,129 total
includes taxes & fees
4 Jan - 5 Jan 2026
Four Seasons Residence Club Aviara, North San Diego

Hampton Inn Carlsbad-North San Diego County

Hampton Inn Carlsbad-North San Diego County
2.5 star property
8.1 km from San Diego Botanic Garden
9.2 out of 10, Wonderful, (1005)
"Hotel was clean, staff friendly, breakfast had a great variety and food was delicious!"
United States
Christina
The price is HK$836
HK$945 total
includes taxes & fees
11 Jan - 12 Jan 2026
Hampton Inn Carlsbad-North San Diego County

Home2 Suites by Hilton Carlsbad

Home2 Suites by Hilton Carlsbad
3.0 star property
7.6 km from San Diego Botanic Garden
9.2 out of 10, Wonderful, (1001)
"The staff was nice, the hotel was clean and the amenities were great!"
United States
Deanna
The price is HK$1,037
HK$1,162 total
includes taxes & fees
4 Jan - 5 Jan 2026
Home2 Suites by Hilton Carlsbad

Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort

Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort
5.0 star property
4.2 km from San Diego Botanic Garden
8.8 out of 10, Excellent, (227)
"Staff, sunset views, service, food at Vaga! All good! Room was spacious and lovely. One issue was that the fire pit area in the room as really wet due to the mist/dew from the weather. "
United States
Dhanashree
The price is HK$3,330
HK$4,199 total
includes taxes & fees
4 Jan - 5 Jan 2026
Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort

Ayres Hotel Vista Carlsbad

Ayres Hotel Vista Carlsbad
3.5 star property
10.3 km from San Diego Botanic Garden
9.6 out of 10, Exceptional, (1934)
"Great Breakfast, clean rooms, easy parking"
United States
Detang
The price is HK$1,004
HK$1,106 total
includes taxes & fees
22 Dec - 23 Dec
Ayres Hotel Vista Carlsbad

Holiday Inn Carlsbad by IHG

Holiday Inn Carlsbad by IHG
3.0 star property
8.8 km from San Diego Botanic Garden
9.0 out of 10, Wonderful, (1003)
"Great accommodations!!"
United States
Mark
The price is HK$755
HK$847 total
includes taxes & fees
4 Jan - 5 Jan 2026
Holiday Inn Carlsbad by IHG

Cape Rey Carlsbad Beach, a Hilton Resort & Spa

Cape Rey Carlsbad Beach, a Hilton Resort & Spa
4.5 star property
6 km from San Diego Botanic Garden
8.8 out of 10, Excellent, (1002)
"Every thing was excellent. The room, staff, and the food!"
United States
Jeanine
The price is HK$1,347
HK$1,824 total
includes taxes & fees
23 Dec - 24 Dec
Cape Rey Carlsbad Beach, a Hilton Resort & Spa

Courtyard by Marriott San Diego Carlsbad

Courtyard by Marriott San Diego Carlsbad
3.0 star property
7.6 km from San Diego Botanic Garden
8.6 out of 10, Excellent, (1001)
"The staff was friendly and helpful, room was clean, great overall stay. "
United States
Charlsie
The price is HK$817
HK$923 total
includes taxes & fees
1 Jan - 2 Jan 2026
Courtyard by Marriott San Diego Carlsbad
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top San Diego Botanic Garden Hotel Reviews

Hotels near other San Diego Botanic Garden attractions

Frequently asked questions

What's the area like around San Diego Botanic Garden?
San Diego Botanic Garden is located in a family-friendly area of Encinitas known for its beautiful beaches and surfing. If you're looking for a convenient place to stay, take a look at the 83 hotels and other accommodation options you'll find within a mile.
What's the best place to stay close to San Diego Botanic Garden?
The Encinitan Hotel & Suites is one of the top choices for your stay based on our traveller data, and this hotel offers free breakfast and an outdoor pool. It's located just a short 0.7 mi (1.1 km) from San Diego Botanic Garden. Other good choices close by include Days Inn by Wyndham Encinitas Moonlight Beach and Moonlight Beach Motel.
How many hotels can I expect to find close to San Diego Botanic Garden?
Expedia has 83 hotels and other accommodation options within a mile from San Diego Botanic Garden.
If I need to cancel the hotel reservation for my stay near San Diego Botanic Garden, will I receive a refund?
Yes, the majority of hotel room reservations are fully refundable if cancelled before the hotel's cancellation deadline, which is often 24 or 48 hours before your scheduled arrival. If you have a reservation that's non-refundable, you might be able to still cancel and get a refund within 24 hours of booking. Enter dates in and click on "Search", then use the "fully refundable" filter to get the top deals on offer near San Diego Botanic Garden.
What can I see and do near San Diego Botanic Garden?
You can enjoy live performances at Belly Up and North Coast Repertory Theatre. Spend some time wandering around San Elijo State Beach, Encinitas Community Park and Poinsettia Park. Moonlight State Beach, South Carlsbad State Beach and Solana Beach are great spots if you want to spend some time by the water during your stay.

Explore a world of travel with Expedia