Harbor Island hotels in San Diego

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Our top choices for Harbor Island hotels

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
Harbor Island
8.4 out of 10, Very good, (3,535 reviews)
"Excellent food, friendly staff, easy check-in, and beautiful setting. "
United States
Emily
The price is HK$1,324
HK$1,918 total
includes taxes & fees
25 May - 26 May
Sheraton San Diego Resort

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
Harbor Island
8.8 out of 10, Excellent, (1,201 reviews)
"Great dinner, friendly staff, clean Rooms"
United States
Heather
The price is HK$1,318
HK$1,515 total
includes taxes & fees
25 May - 26 May
Hilton San Diego Airport/Harbor Island

Lafayette Hotel & Club

Lafayette Hotel & Club
4.0 star property
7 km from Harbor Island
9.4 out of 10, Exceptional, (1,658 reviews)
"This is a must stay place in San Diego"
United States
Kristi
The price is HK$1,950
HK$2,242 total
includes taxes & fees
25 May - 26 May
Lafayette Hotel & Club

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 6 km from Harbor Island
8.6 out of 10, Excellent, (1,442 reviews)
"Perfect place for a family trip "
United States
Krystal
The price is HK$1,310
HK$1,920 total
includes taxes & fees
25 May - 26 May
San Diego Mission Bay Resort

The Alcala Hotel Mission Valley/Seaworld

The Alcala Hotel Mission Valley/Seaworld
2.5 star property
4.3 km from Harbor Island
8.2 out of 10, Very good, (80 reviews)
"Everything was clean and nice, great breakfast 😋"
United States
Balwin
The price is HK$650
HK$747 total
includes taxes & fees
26 May - 27 May
The Alcala Hotel Mission Valley/Seaworld

Ramada by Wyndham San Diego Poway Miramar

Ramada by Wyndham San Diego Poway Miramar
2.0 star property
28.7 km from Harbor Island
7.2 out of 10, Good, (1,003 reviews)
"Well maintained property, staff were professional and very nice"
United States
Cherie
The price is HK$662
HK$729 total
includes taxes & fees
25 May - 26 May
Ramada by Wyndham San Diego Poway Miramar

Best Western Americana Inn

Best Western Americana Inn
2.5 star property
23.1 km from Harbor Island
9.0 out of 10, Wonderful, (1,288 reviews)
"Everything was very pleasant,the place was super clean, and the breakfast was delicious👍"
United States
Nancy
The price is HK$889
HK$1,011 total
includes taxes & fees
28 May - 29 May
Best Western Americana Inn

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 8.7 km from Harbor Island
8.0 out of 10, Very good, (2,117 reviews)
"Great experience, will stay here again"
United States
Victoria
The price is HK$755
HK$868 total
includes taxes & fees
26 May - 27 May
GreenTree Inn San Diego Mission Bay

Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
3.3 km from Harbor Island
8.4 out of 10, Very good, (6,149 reviews)
"Great place for a family vacation!"
United States
Ann
The price is HK$1,218
HK$1,685 total
includes taxes & fees
24 May - 25 May
Wyndham San Diego Bayside

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 6.5 km from Harbor Island
8.8 out of 10, Excellent, (2,081 reviews)
"Great for families, bay view was incredible! "
United States
Anniesse
The price is HK$1,332
HK$1,967 total
includes taxes & fees
25 May - 26 May
Bahia Resort Hotel

The Shoal La Jolla Beach

The Shoal La Jolla Beach
2.5 star property
13.4 km from Harbor Island
8.8 out of 10, Excellent, (1,000 reviews)
"I’ve booked my mom here a few times during her visits with me & the hotel & staff are always amazing!"
United States
Antonia
The price is HK$1,498
HK$1,692 total
includes taxes & fees
25 May - 26 May
The Shoal La Jolla Beach

Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.3 km from Harbor Island
8.4 out of 10, Very good, (2,009 reviews)
"I highly recommend this hotel it is beautiful and the staff is great"
United States
Juanita
The price is HK$980
HK$1,126 total
includes taxes & fees
25 May - 26 May
Best Western Plus Hacienda Hotel Old Town

Holiday Inn Express Hotel & Suites San Diego Otay Mesa by IHG

Holiday Inn Express Hotel & Suites San Diego Otay Mesa by IHG
2.5 star property
31.2 km from Harbor Island
8.2 out of 10, Very good, (1,737 reviews)
"great breakfast and nice staff"
United States
rosita
The price is HK$1,018
HK$1,158 total
includes taxes & fees
7 Jun - 8 Jun
Holiday Inn Express Hotel & Suites San Diego Otay Mesa by IHG

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
2 km from Harbor Island
9.2 out of 10, Wonderful, (3,580 reviews)
"It was a very nice stay all around "
United States
Gregorio
The price is HK$1,192
HK$1,370 total
includes taxes & fees
25 May - 26 May
Bay Club Hotel & Marina

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
3.3 km from Harbor Island
7.4 out of 10, Good, (4,221 reviews)
"Nice stay, clean room"
United States
Luis
The price is HK$737
HK$847 total
includes taxes & fees
28 May - 29 May
Wyndham Garden San Diego Near SeaWorld

Old Town Western Inn & Suites

Old Town Western Inn & Suites
2.5 star property
Old Town San Diego, 2.9 km from Harbor Island
7.8 out of 10, Good, (1,000 reviews)
"Very good area for visiting the area"
United States
Carla
The price is HK$782
HK$882 total
includes taxes & fees
25 May - 26 May
Old Town Western Inn & Suites

Westgate Hotel

Westgate Hotel
4.5 star property
4.2 km from Harbor Island
9.2 out of 10, Wonderful, (1,002 reviews)
"Beautiful and very clean hotel! Would definitely stay again!"
United States
Nancy
The price is HK$1,258
HK$1,731 total
includes taxes & fees
24 May - 25 May
Westgate Hotel

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Harbor Island
8.4 out of 10, Very good, (1,886 reviews)
"Near some great restaurants and overall a nice hotel"
United States
John
The price is HK$869
HK$998 total
includes taxes & fees
7 Jun - 8 Jun
Best Western Yacht Harbor Hotel

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
2.1 km from Harbor Island
8.6 out of 10, Excellent, (1,001 reviews)
"location was excellent"
United States
Guillermo
The price is HK$797
HK$899 total
includes taxes & fees
27 May - 28 May
Sea Harbor Hotel

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.3 km from Harbor Island
8.6 out of 10, Excellent, (3,682 reviews)
"Room is clean, staff are especially helpful and courteous, breakfast was great…all in all made my stay comfortable and convenient because just minutes away from the airport…would stay here again"
United States
Parley Vinn Anastacius
The price is HK$819
HK$941 total
includes taxes & fees
25 May - 26 May
Comfort Inn Sea World Area
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Harbor Island

Find the best Harbor Island areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

Gaslamp Quarter

San Diego’s historic heart has shed its seedy past to emerge as one of the city’s premier dining, shopping and entertainment hubs.

Mission Bay

If you're spending some time in Mission Bay, Mission Bay and Mission and Pacific Beaches are top sights worth seeing.

Top Harbor Island Hotel Reviews

Frequently asked questions

What's it like in Harbor Island?
Harbor Island is a scenic neighbourhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.
Where is the best place to stay in Harbor Island?
Based on our traveller data, Sheraton San Diego Resort is one of the top choices for your stay in Harbor Island. This hotel is a short 1-minute walk from San Diego Bay, and it offers a marina and 3 outdoor pools.
How many hotels should I expect to find in the Harbor Island area?
Book one of Expedia's 6 hotels and other accommodation options in Harbor Island and start exploring everything San Diego has to offer.
If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?
Yes, the majority of hotel reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and get a refund within 24 hours of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to view the top deals on offer in Harbor Island.
What is there to do around this San Diego neighbourhood?
San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, make sure that you visit other sights such as USS Midway Museum or Port of San Diego.

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