A large abstract sculpture with a spiral base in a park.

San Diego Shelter Island Hotels

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Check prices for these dates

Next weekend
13 Nov - 15 Nov
In two weeks
20 Nov - 22 Nov

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Our top choices for Shelter Island hotels

A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

1. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,739 reviews)
"Very clean property and helpful, friendly staff."
United States
Dean
The price is HK$1,239
HK$1,425 total
includes taxes & fees
22 Nov - 23 Nov
Hampton Inn & Suites San Diego Airport Liberty Station
A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

2. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,707 reviews)
"Very pleasant stay."
United States
Alicia
The price is HK$1,376
HK$1,581 total
includes taxes & fees
16 Nov - 17 Nov
Homewood Suites by Hilton San Diego Airport/Liberty Station
A hotel courtyard with outdoor seating, palm trees, and a view of the sea.

3. Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,240 reviews)
"I have stayed there before. Very comfortable and close to the airport."
United States
Maureen
The price is HK$1,458
HK$1,676 total
includes taxes & fees
9 Nov - 10 Nov
Courtyard by Marriott San Diego Airport/Liberty Station
A table with a fire feature, a charcuterie board, and two glasses of wine, overlooking a marina with boats.

4. Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (4,061 reviews)
"Beautiful, clean hotel and friendly staff!!"
United States
Robin
The price is HK$1,192
HK$1,370 total
includes taxes & fees
10 Nov - 11 Nov
Bay Club Hotel & Marina
A resort with two-story buildings, balconies, and a pool area.

5. Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (3,161 reviews)
"Best place to stay in San Diego and I will be coming back"
United States
Ronald
The price is HK$1,207
HK$1,545 total
includes taxes & fees
23 Nov - 24 Nov
Humphreys Half Moon Inn
A modern building with a sloped roof and large windows, surrounded by palm trees and a well-maintained garden.

6. Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
9.0 out of 10, Wonderful, (1,639 reviews)
"Excellent location, great amenities and easy parking close to room."
Australia
Adam
The price is HK$993
HK$1,141 total
includes taxes & fees
23 Nov - 24 Nov
Best Western Plus Island Palms Hotel & Marina
An outdoor patio with string lights, tables, chairs, and a bar area with bottles.

7. Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,219 reviews)
"Nice view of the harbor"
United States
Alan
The price is HK$1,215
HK$1,397 total
includes taxes & fees
29 Nov - 30 Nov
Hilton San Diego Airport/Harbor Island
A spacious lounge area with a high ceiling, a fireplace, and large windows offering a view of the outdoors.

8. TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
8.8 out of 10, Excellent, (1,002 reviews)
"Such a great place to stay"
United States
Chase
The price is HK$1,333
HK$1,533 total
includes taxes & fees
22 Nov - 23 Nov
TownePlace Suites by Marriott San Diego Airport/Liberty Station
A building with a sign reading "the Pearl" and a modern design with large windows and a stone facade.

9. The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1,000 reviews)
"Always enjoy staying at The Pearl"
United States
Jane
The price is HK$1,073
HK$1,212 total
includes taxes & fees
8 Dec - 9 Dec
The Pearl Hotel
A well-lit retail area with shelves displaying various products, a poolside view, and a palm tree.

10. Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.4 out of 10, Very good, (1,089 reviews)
"The location is great."
United States
Roxanne
The price is HK$818
HK$923 total
includes taxes & fees
10 Nov - 11 Nov
Sea Harbor Hotel
A square pizza on a wooden board with a fire pit in the background.

11. DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.4 out of 10, Very good, (1,102 reviews)
"Great location on the water with great views."
Canada
Mike
The price is HK$1,086
HK$1,249 total
includes taxes & fees
22 Nov - 23 Nov
DoubleTree by Hilton San Diego Bayside
A hotel room with two beds, a desk, a chair, and a large window with a view of the outdoors.

12. Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.4 out of 10, Very good, (2,108 reviews)
"Clean rooms, great breakfast"
United States
Elizabeth
The price is HK$894
HK$1,025 total
includes taxes & fees
10 Nov - 11 Nov
Best Western Yacht Harbor Hotel
View from room

13. The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.4 out of 10, Very good, (862 reviews)
"Great stay."
United States
Jocelyn
The price is HK$1,151
HK$1,323 total
includes taxes & fees
15 Nov - 16 Nov
The Monsaraz San Diego, Tapestry Collection by Hilton
A marina with boats, a yacht, and a balcony with two chairs and a table.

14. Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.3 km from Shelter Island
8.2 out of 10, Very good, (1,002 reviews)
"Would definitely stay here again"
United States
Michael
The price is HK$1,436
HK$2,121 total
includes taxes & fees
6 Dec - 7 Dec
Kona Kai San Diego
A balcony with a sofa, chairs, and a small table, overlooking a clear blue sky and palm trees.

15. LYFE INN & SUITES by AGA - San Diego Airport/Point Loma

LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
2.0 star property
1.2 km from Shelter Island
8.0 out of 10, Very good, (200 reviews)
"Clean room nice staff quiet place overall and in a good area."
United States
Carolina
The price is HK$840
HK$947 total
includes taxes & fees
8 Nov - 9 Nov
LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
An aerial view of a marina with numerous boats docked, surrounded by a residential area with buildings and streets.

16. Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,745 reviews)
"Great place! Better location and wonderful Staff"
United States
JJ
The price is HK$771
HK$871 total
includes taxes & fees
17 Nov - 18 Nov
Comfort Inn San Diego Airport At The Harbor
A bedroom with a bed, a nightstand, a TV, and a view of the outdoors.

17. Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.8 out of 10, Good, (523 reviews)
"Quick and easy place to stay before my flight in the morning."
Canada
Clint
The price is HK$658
HK$790 total
includes taxes & fees
9 Nov - 10 Nov
Hotel Point Loma
A marina with numerous boats docked, a clear sky with the sun setting, and a cityscape in the background.

18. Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.6 out of 10, Good, (1,002 reviews)
"We are a repeat guest.A great location, great amenities & breakfast. Hotel staff was polite, a nice stay."
United States
Diana
The price is HK$709
HK$813 total
includes taxes & fees
10 Nov - 11 Nov
Ramada by Wyndham San Diego Airport
A modern reception area with a wooden bench and a green hedge.

19. Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,000 reviews)
"Great place to stay. I needed a simple room and bathroom. It was clean, comfortable, the towels were nice and the location was perfect. Enjoyed it!"
United States
Kathryn
The price is HK$597
HK$673 total
includes taxes & fees
9 Nov - 10 Nov
Hotel Aqua Mar
An outdoor patio area with seating arrangements, a pergola, and a green wall.

20. Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (627 reviews)
"Always a great stay!"
United States
Robert
The price is HK$432
HK$488 total
includes taxes & fees
18 Nov - 19 Nov
Samesun Ocean Beach - Hostel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Compare popular hotels close to Shelter Island

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.
Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
9.2
Wonderful
1,739 reviews
View
A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.
Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
9.4
Exceptional
1,707 reviews
View
A hotel courtyard with outdoor seating, palm trees, and a view of the sea.
Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
9.2
Wonderful
1,240 reviews
View
A table with a fire feature, a charcuterie board, and two glasses of wine, overlooking a marina with boats.
Bay Club Hotel & Marina
3.5 star property
9.2
Wonderful
4,061 reviews
View
A resort with two-story buildings, balconies, and a pool area.
Humphreys Half Moon Inn
3.5 star property
9.2
Wonderful
3,161 reviews
View

Top Shelter Island Hotel Reviews

Humphreys Half Moon Inn

Humphreys Half Moon Inn

10/10 Excellent
"The staff were amazingly friendly. My girlfriend and I loved relaxing here!"
Elliot 4-night trip
Posted 5 hours ago
Humphreys Half Moon Inn

Other attractions near Shelter Island

Vessel Restaurant

After visiting Vessel Restaurant, make a plan to see the other sights and activities in San Diego. In the area, take in the great live music and beautiful sunsets.
See properties

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 38 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Humphreys Half Moon Inn.
How many hotels will I be able to find near Shelter Island?
Expedia has 38 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or Whaley House Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.

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