San Diego Shelter Island Hotels

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Our top choices for Shelter Island hotels

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
9.0 out of 10, Wonderful, (1,594 reviews)
"A wonderful location and stay."
United States
Margaret
The price is HK$1,377
HK$1,583 total
includes taxes & fees
25 May - 26 May
Best Western Plus Island Palms Hotel & Marina

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2,975 reviews)
"Very nice hotel in a wonderful location"
United States
Peter
The price is HK$1,559
HK$1,949 total
includes taxes & fees
25 May - 26 May
Humphreys Half Moon Inn

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,505 reviews)
"Outstanding place to stay, friendly staff, incredible breakfast!"
United States
Michael
The price is HK$1,559
HK$1,792 total
includes taxes & fees
25 May - 26 May
Homewood Suites by Hilton San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,298 reviews)
"Great location, good parking, great staff."
United States
Rosemary
The price is HK$1,403
HK$1,612 total
includes taxes & fees
25 May - 26 May
Courtyard by Marriott San Diego Airport/Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,721 reviews)
"Good location, clean room and nice staff. A great place to stay."
United States
Patricia
The price is HK$1,392
HK$1,600 total
includes taxes & fees
7 Jun - 8 Jun
Hampton Inn & Suites San Diego Airport Liberty Station

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1,001 reviews)
"Amazing place to stay! "
United States
Jodi
The price is HK$1,365
HK$1,542 total
includes taxes & fees
26 May - 27 May
The Pearl Hotel

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1,003 reviews)
"location was excellent"
United States
Guillermo
The price is HK$797
HK$899 total
includes taxes & fees
27 May - 28 May
Sea Harbor Hotel

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1,002 reviews)
"Love it great place"
United States
Derek
The price is HK$1,481
HK$1,702 total
includes taxes & fees
25 May - 26 May
TownePlace Suites by Marriott San Diego Airport/Liberty Station

LYFE INN & SUITES by AGA - San Diego Airport/Point Loma

LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
2.0 star property
1.2 km from Shelter Island
8.6 out of 10, Excellent, (22 reviews)
"Near airport."
United States
Justin
The price is HK$874
HK$986 total
includes taxes & fees
25 May - 26 May
LYFE INN & SUITES by AGA - San Diego Airport/Point Loma

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,202 reviews)
The price is HK$1,392
HK$1,600 total
includes taxes & fees
25 May - 26 May
Hilton San Diego Airport/Harbor Island

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very good, (1,002 reviews)
"The property is old and the front desk clerk was the worst very poor customer service. "
United States
Cameron
The price is HK$1,638
HK$2,352 total
includes taxes & fees
25 May - 26 May
Kona Kai San Diego

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.4 out of 10, Very good, (744 reviews)
"Decent location but have to find street parking"
United States
Hema
The price is HK$1,310
HK$1,506 total
includes taxes & fees
7 Jun - 8 Jun
The Monsaraz San Diego, Tapestry Collection by Hilton

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.4 out of 10, Very good, (1,029 reviews)
"Great restaurants"
United States
Gary
The price is HK$1,318
HK$1,515 total
includes taxes & fees
26 May - 27 May
DoubleTree by Hilton San Diego Bayside

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.4 out of 10, Very good, (1,896 reviews)
"The rooms were well kept and the breakfast was great!"
United States
Jessica
The price is HK$870
HK$998 total
includes taxes & fees
7 Jun - 8 Jun
Best Western Yacht Harbor Hotel

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,509 reviews)
"I would stay there again"
United States
Steve
The price is HK$921
HK$1,040 total
includes taxes & fees
26 May - 27 May
Comfort Inn San Diego Airport At The Harbor

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.6 out of 10, Good, (1,002 reviews)
"Good place "
United States
Karen
The price is HK$766
HK$879 total
includes taxes & fees
25 May - 26 May
Ramada by Wyndham San Diego Airport

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.6 out of 10, Good, (425 reviews)
"Nice stay for 2 nights. Close to coffee shops and restaurants."
United States
ERNESTO
The price is HK$697
HK$785 total
includes taxes & fees
25 May - 26 May
Hotel Point Loma

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,001 reviews)
"fairly priced hotel"
United States
Bruce
The price is HK$563
HK$634 total
includes taxes & fees
25 May - 26 May
Hotel Aqua Mar

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (506 reviews)
"Excellent stay, clean and nice people!"
United States
Christine
The price is HK$458
HK$518 total
includes taxes & fees
8 Jun - 9 Jun
Samesun Ocean Beach - Hostel

The Inn at Sunset Cliffs

The Inn at Sunset Cliffs
2.5 star property
Ocean Beach, 3.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,004 reviews)
"Beautiful views"
United States
Bryan
The price is HK$1,875
HK$2,114 total
includes taxes & fees
26 May - 27 May
The Inn at Sunset Cliffs
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels close to Shelter Island

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Exterior
Best Western Plus Island Palms Hotel & Marina
3.0 star property
9.0
Wonderful
1,594 reviews
View
Property grounds
Humphreys Half Moon Inn
3.5 star property
9.2
Wonderful
2,975 reviews
View
Exterior
Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
9.4
Exceptional
1,505 reviews
View
Courtyard view
Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
9.2
Wonderful
1,298 reviews
View
Lobby
Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
9.2
Wonderful
1,721 reviews
View

Top Shelter Island Hotel Reviews

Hotels near other Shelter Island attractions

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 39 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Shelter Island?
Adjacent to Shelter Island, Kona Kai San Diego is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Best Western Plus Island Palms Hotel & Marina.
How many hotels will I be able to find near Shelter Island?
Expedia has 39 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse and Whaley House Museum. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.

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