Best North Mission Beach Hotels in 2026 from HK$572 - Fully Refundable Options

A pier extending into calm waters with people on it and a sandy beach with seaweed and a few individuals.

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Go beyond your typical stay in North Mission Beach

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Our top choices for North Mission Beach hotels

A pool area with lounge chairs and a hot tub, overlooking the ocean.

A hotel with a modern facade, large windows, and a palm tree in the foreground.

A living room with a grey sofa, red armchairs, a wooden coffee table, and a bookshelf filled with books.

A balcony with a view of the beach, two blue chairs, a small table, and a potted plant.

1. The Wayfarer San Diego

Mission Beach

Brittney

HK$2,025

HK$2,327 total

includes taxes & fees

22 Sept - 23 Sept

A modern architectural entrance with a central archway, illuminated by wall-mounted lights, flanked by planters with cacti, and a pathway leading through the arch.

The reception area of The Boardwalk Hotel with a wooden reception desk, a chalkboard sign, and a potted plant.

A modern living room with a sofa, a coffee table, a dining table with chairs, a TV, and a balcony with a view.

A person in a hot tub with a wall of greenery and a sign that says 'TAKE THE PLUNGE'.

2. Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Mission Beach

Kimberly

HK$1,371

HK$1,546 total

includes taxes & fees

23 Aug - 24 Aug

A couple walking through a wooden door into a building with a tropical garden view.

An aerial view of a coastal city with a marina, beachfront hotels, and a prominent hotel with a large balcony overlooking the ocean.

A room with a large glass door leading to a grassy deck with a table and chairs, overlooking a marina with boats and a clear sky.

A spacious lobby with a waterfall feature, wooden decor, and comfortable seating areas.

3. Catamaran Resort and Spa

Mission Beach

Ashley

HK$1,592

HK$2,247 total

includes taxes & fees

7 Sept - 8 Sept

A modern building with a unique architectural design, featuring a balcony and a wooden deck area.

A living room with a wooden coffee table, a grey sofa, a TV mounted on the wall, a fireplace, and a ceiling fan.

4. 2BR Condo Steps to the Beach & Blvd-dog-friendly

Mission Beach

HK$1,944

HK$4,896 total

includes taxes & fees

25 Aug - 26 Aug

A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

A modern lobby with wooden ceiling beams, comfortable seating with yellow cushions, a large wooden coffee table, and large windows offering a view of palm trees and a sunset.

A modern hotel with a prominent entrance, multiple floors, and a parking lot.

An outdoor seating area with tables and chairs, umbrellas, and a fire feature.

5. Hampton Inn & Suites San Diego Airport Liberty Station

San Diego

Ivan

HK$1,267

HK$1,457 total

includes taxes & fees

30 Aug - 31 Aug

A pool area with a hot tub, lounge chairs, and umbrellas.

A dining table set for a wedding with floral centerpieces and candles, overlooking a marina with boats.

A hotel room with a bed, a lamp, and a box of pizza.

A marina with boats, a bridge, and a building with a pool and palm trees.

6. The Dana on Mission Bay

Mission Bay

elizabeth

HK$1,326

HK$1,750 total

includes taxes & fees

30 Aug - 31 Aug

A hotel room with two beds, a sofa, a desk, and a TV.

A modern reception desk with a woman standing behind it, a large digital display, and a sign for 'Haightay Inn Express'.

A Holiday Inn Express building with a brick facade, large tropical plants, and a bench in front.

A sunset over the ocean with waves approaching the shore.

7. Holiday Inn Express San Diego - SeaWorld Area by IHG

Point Loma

Xiaotong

HK$1,058

HK$1,217 total

includes taxes & fees

30 Aug - 31 Aug

A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

A pool area with lounge chairs, a palm tree, and a view of a bridge and buildings in the background.

A modern kitchen area with wooden cabinets, marble countertops, and a central island with plates.

A hotel with a well-maintained lawn, outdoor lighting, and a clear view of the building's facade.

8. Homewood Suites by Hilton San Diego Airport/Liberty Station

Point Loma

Sergio

HK$1,434

HK$1,648 total

includes taxes & fees

1 Sept - 2 Sept

An outdoor patio with a stone fire pit, outdoor seating, string lights, and a tall, narrow heater.

A swimming pool with a visible water filtration system and a tiled edge.

A beach with clear skies, a rocky cliff, and a lighthouse in the distance.

A multi-level hotel lobby with dining areas, a reception desk, and a large TV screen.

9. Embassy Suites by Hilton San Diego La Jolla

University City

Sarineh

HK$1,408

HK$1,842 total

includes taxes & fees

30 Aug - 31 Aug

A hotel room with two beds, a desk, a chair, and a large window with a view of the outdoors.

A modern hotel room with a blue sofa, a grey armchair, a round coffee table, and a large window offering a view of the outdoors.

A gym with a treadmill, elliptical, and weight machines.

A hotel room with two beds, a desk, and a chair.

10. Best Western Yacht Harbor Hotel

Point Loma

Donald

HK$1,027

HK$1,179 total

includes taxes & fees

23 Aug - 24 Aug

An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

An outdoor dining area with tables and chairs, umbrellas, and string lights against a sunset backdrop.

A hotel room with a large bed, a desk, a chair, and a view of greenery through large windows.

A modern building with a curved roof, surrounded by lush tropical vegetation.

11. Paradise Point Resort & Spa

Mission Bay

Jared

HK$1,562

HK$2,210 total

includes taxes & fees

7 Sept - 8 Sept

A coastal promenade with palm trees, a beach, and a medical building.

A balcony with a view of the beach and ocean, palm trees, and a pool area.

A pool area with lounge chairs and umbrellas, surrounded by palm trees and a building with large windows.

A reception area with a large wall sign reading "HELLO SUNSHINE SAN DIEGO" and a framed picture above a reception desk.

12. Ocean Park Inn

Pacific Beach

Vitaliy

HK$1,969

HK$2,263 total

includes taxes & fees

7 Sept - 8 Sept

A modern building with multiple windows, outdoor seating, and a chessboard.

A hotel with a pool, lounge chairs, and a sunset sky.

A Hampton Inn & Suites by Hilton building with a covered entrance and a prominent sign.

A modern hotel reception area with a marble counter, a 'Welcome to Hampton' sign, and a reception desk.

13. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Point Loma

Steffany

HK$1,215

HK$1,397 total

includes taxes & fees

30 Aug - 31 Aug

A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

A coastal hotel with multiple buildings, a marina with boats, and a beach area.

A spacious lobby with a high ceiling, large windows, and a view of palm trees.

An outdoor seating area with a canopy, lounge chairs, and a fire pit.

14. San Diego Mission Bay Resort

Mission Bay

Maria

HK$1,639

HK$2,298 total

includes taxes & fees

7 Sept - 8 Sept

A hotel with a central courtyard, palm trees, and a fountain.

A spacious lobby with leather seating, a reception desk, a bar area, and a staircase.

A fountain surrounded by tables and chairs, with string lights and palm trees.

An outdoor patio area with a central fountain, string lights, and potted plants.

15. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Old Town San Diego

Cari

HK$951

HK$1,094 total

includes taxes & fees

20 Sept - 21 Sept

An outdoor lounge area with seating, a fire feature, and a pool in the background.

A hotel with a large pool surrounded by lounge chairs and umbrellas, palm trees, and a well-lit building facade.

A spacious lobby with a bar area, leather armchairs, and a reception desk.

A modern restaurant with multiple seating areas, including booths and tables. There are hanging lights and a variety of plants.

16. Town and Country San Diego

Mission Valley

Anthony

HK$1,393

HK$1,871 total

includes taxes & fees

29 Aug - 30 Aug

A reception area with a stone archway, a reception desk, and potted plants.

A buffet with labeled food stations including omelets and cheese.

An outdoor patio with tables and chairs, potted plants, and umbrellas.

A Holiday Inn Express building with a prominent sign, a parking lot, and a landscaped entrance area.

17. Holiday Inn Express San Diego Airport - Old Town by IHG

Mission Hills

Tirthankar

HK$1,105

HK$1,271 total

includes taxes & fees

25 Aug - 26 Aug

A pool area with lounge chairs and palm trees.

A round window with a view of a cityscape, palm trees, and a clear sky.

A buffet with various food options, wooden cabinets, and a ceiling fan.

A hotel entrance with a covered patio, palm trees, and a flag.

18. Best Western Plus Hacienda Hotel Old Town

Old Town San Diego

Robert

HK$1,051

HK$1,209 total

includes taxes & fees

30 Aug - 31 Aug

A balcony with a table set for two, overlooking a marina with numerous boats.

A modern hotel room with a balcony, a sofa, a chair, a coffee table, and two bedside tables with lamps.

A marina with multiple boats docked, a multi-story building with outdoor seating, and a clear view of the surrounding coastline.

A pool area with lounge chairs and umbrellas, overlooking a marina with numerous boats.

19. Bay Club Hotel & Marina

Point Loma

Smarika

HK$1,235

HK$1,420 total

includes taxes & fees

30 Aug - 31 Aug

A living room with a large window, a flat-screen TV, and a patterned rug.

A hotel room with a glass table, two wooden chairs, a laptop, a pen, and a lamp.

A multi-story hotel with a yellow facade, covered outdoor seating area, and a parking lot.

A dining area with multiple tables and chairs, a television mounted on the wall, and a window with blinds.

20. GreenTree Inn San Diego Mission Bay

Pacific Beach

Alma

HK$819

HK$942 total

includes taxes & fees

30 Aug - 31 Aug

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Learn more about North Mission Beach

Venture to popular sights like Mission Beach and Mission Bay as you discover North Mission Beach.

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A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Top North Mission Beach Hotel Reviews

The Wayfarer San Diego

10/10 Excellent

"Fantastic time! Make sure to stay at this hotel if you enjoy the Beach, Pool and Boardwalk!"

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

10/10 Excellent

"I stayed four nights on a solo trip and couldn’t have been happier with the hotel and location. I was initially concerned that it would be busy and loud being so close to the beach and the bay, but the loudest things were the seagulls lol"

OCEAN VIEWS Modern House-Great for Groups & Families, Minisplit Air in All Rooms

10/10 Excellent

"We were 6 women all over 60 years old who have been friends from 70s and 80s having worked together .There was plenty of beds to go around ( even the double size bunk beds were very comfortable)and 3 bathrooms worked well even though 2 were small they were certainly adequate for our needs. We absolutely loved having the fire pit for evening after coming back from dinner. We never even turned on the TV as we were catching up on our lives but they were available if we wanted to use them. The air conditioning was extremely welcome as was a bit unusual humid weather. Parking worked well. We had a large SUV so we parked in front of garage and mostly were inside the red lines as requested. The host was very responsive to our needs and questions. We always rent in this area due to walk ability to great eats . All in all great experience."

TOP FLOOR BEACH CONDO WITH STUNNING VIEWS JUST STEPS TO THE SAND

10/10 Excellent

"Great location, easy check in, had all the necessities. Host was great to work with. Highly recommended."

Steps to sand & ocean view from inside the unit!

10/10 Excellent

"minute walk to the water. closer to pb than mission, Very communicative host, easy to deal with no problems at all."

Beachside Retreat | Steps to the Sand + EV Charging & Spacious Comfort

10/10 Excellent

"Great place."

40 Steps From The Beach!! Huge Roof top views!!!

10/10 Excellent

"It is in a great location, one thing to note is the parking, if you do not have a small suv or small sedan you’ll be playing the street parking game plus the street sweepers, but we knew going in we probably wouldn’t fit in the garage but did not realize the extreme parking game we’d have play we will definitely stay again."

Relaxing Beach Cottage Retreat

10/10 Excellent

"The home was light and bright, which is what I hoped for from the pictures. The bed is comfortable. We appreciated all the towels that we had available for us to use throughout our stay. We found the location to be just what we needed. As we didn't rent a car, we used Lyft quite a bit. We found that the drivers found us easily and we never had to wait more than a few minutes for a ride so the location is super convenient. We would stay here again the next time we visit San Diego."

Luxurious Beach Retreat Just 100 steps to the sand

10/10 Excellent

"The host was very responsive and this location was exactly what we were looking for! The quality of our stay was awesome"

More cheap stays in North Mission Beach

Heritage Inn San Diego

3333 Channel Way San Diego CA

HK$498

HK$572 total

13 Sept - 14 Sept

includes taxes & fees

7/10 Good! (1,884 reviews)

Pleasant Inn

5550 Clairemont Mesa Blvd San Diego CA

HK$593

HK$681 total

17 Sept - 18 Sept

includes taxes & fees

8.6/10 Excellent! (1,528 reviews)

California Suites Hotel

5415 Clairemont Mesa Blvd San Diego CA

HK$628

HK$721 total

22 Sept - 23 Sept

includes taxes & fees

7.8/10 Good! (2,894 reviews)

The Alcala Hotel Mission Valley/Seaworld

San Diego CA

HK$817

HK$939 total

23 Aug - 24 Aug

includes taxes & fees

GreenTree Inn San Diego Mission Bay

4540 Mission Bay Drive San Diego CA

HK$819

HK$942 total

30 Aug - 31 Aug

includes taxes & fees

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

2485 Hotel Circle Place San Diego CA

HK$1,184

HK$1,361 total

1 Sept - 2 Sept

includes taxes & fees

8/10 Very good! (2,932 reviews)

Hotels in North Mission Beach with star-rating

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North Mission Beach hotels from HK$572

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in North Mission Beach

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for North Mission Beach hotels

1. The Wayfarer San Diego

2. Boardwalk Hotel: Bikes, Boards & Beach Gear Included

3. Catamaran Resort and Spa

4. 2BR Condo Steps to the Beach & Blvd-dog-friendly

5. Hampton Inn & Suites San Diego Airport Liberty Station

6. The Dana on Mission Bay

7. Holiday Inn Express San Diego - SeaWorld Area by IHG

8. Homewood Suites by Hilton San Diego Airport/Liberty Station

9. Embassy Suites by Hilton San Diego La Jolla

10. Best Western Yacht Harbor Hotel

11. Paradise Point Resort & Spa

12. Ocean Park Inn

13. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

14. San Diego Mission Bay Resort

15. Hilton Garden Inn San Diego Old Town/SeaWorld Area

16. Town and Country San Diego

17. Holiday Inn Express San Diego Airport - Old Town by IHG

18. Best Western Plus Hacienda Hotel Old Town

19. Bay Club Hotel & Marina

20. GreenTree Inn San Diego Mission Bay

Learn more about North Mission Beach

Top North Mission Beach Hotel Reviews

The Wayfarer San Diego

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

OCEAN VIEWS Modern House-Great for Groups & Families, Minisplit Air in All Rooms

TOP FLOOR BEACH CONDO WITH STUNNING VIEWS JUST STEPS TO THE SAND

Steps to sand & ocean view from inside the unit!

Beachside Retreat | Steps to the Sand + EV Charging & Spacious Comfort

40 Steps From The Beach!! Huge Roof top views!!!

Relaxing Beach Cottage Retreat

Luxurious Beach Retreat Just 100 steps to the sand

More cheap stays in North Mission Beach

Heritage Inn San Diego

Pleasant Inn

California Suites Hotel

The Alcala Hotel Mission Valley/Seaworld

GreenTree Inn San Diego Mission Bay

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Hotels in North Mission Beach with star-rating

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