Best Port Jefferson Hotels in 2026 from HK$632 - Fully Refundable Options

A lifeguard tower, a boat, and a sandy beach with the ocean in the background.

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Our top choices for Port Jefferson hotels

A covered wooden deck with white railings, blue doors, and hanging flower arrangements.

A living room with a patterned sofa set, a glass coffee table, and a decorative chandelier.

A marina with multiple yachts docked at night.

A marina with boats docked, a pier with blue umbrellas and white chairs, and a flagpole with flags.

1. Danfords Hotel and Marina

Port Jefferson

Martin

HK$1,194

HK$1,667 total

includes taxes & fees

7 Oct - 8 Oct

A hotel with a parking lot, a large building with multiple floors, and a forested area in the background.

A modern kitchen with granite countertops, a variety of baked goods, and a coffee station.

A spacious lobby with a reception desk, seating area, and decorative lighting.

A modern bar area with a long counter, bar stools, and a variety of bottles and glasses.

2. Hilton Garden Inn Stony Brook

Stony Brook

zhe

HK$1,061

HK$1,212 total

includes taxes & fees

3 Nov - 4 Nov

A sign for Stony Brook State University of New York surrounded by greenery and flowers.

A modern hotel room with a large bed, a wooden headboard, a built-in bathtub, and a flat-screen TV.

A modern hotel lobby with a central coffee bar, seating areas, and a flat-screen TV mounted on the wall.

3. Holiday Inn Express Stony Brook by IHG

Centereach

Patricia

HK$961

HK$1,097 total

includes taxes & fees

26 Oct - 27 Oct

4. Americas Best Value Inn Port Jefferson Station Long Island

Port Jefferson Station

Seth

HK$913

HK$1,043 total

includes taxes & fees

4 Oct - 5 Oct

A large indoor swimming pool with a skylight, lounge chairs, and a seating area with tables.

A hotel dining area with wooden tables and chairs, a central bar, and a television screen.

A gazebo with a white exterior and a grey roof, surrounded by lush greenery and a paved patio area with two wicker chairs and a small table.

A hotel room with a bed, a sofa, a desk with a TV, a microwave, and a view of greenery outside.

5. Hampton Inn Long Island-Brookhaven

Farmingville

Anjulliane

HK$894

HK$1,022 total

includes taxes & fees

1 Nov - 2 Nov

A well-organized snack and beverage section with shelves stocked with various products, a refrigerated display, and a small table with snacks.

A banquet hall with round tables set for a formal event, featuring white tablecloths, gold accents, and floral centerpieces.

A modern office space with two desks, each with a computer monitor, keyboard, and a vase of flowers.

A modern hotel lobby with a reception desk, directional signs, a dining area with chairs, a sofa, and a large framed artwork on the wall.

6. Holiday Inn Long Island-Islip Arpt East by IHG

Holtsville

Mohammad

HK$824

HK$941 total

includes taxes & fees

26 Oct - 27 Oct

A swimming pool with a tiled deck, surrounded by windows and chairs.

A modern kitchen with grey cabinets, a black countertop, and a wooden floor.

A multi-story hotel with a prominent American flag, a covered entrance, and a brick facade.

A compact kitchen with wooden cabinets, a stainless steel refrigerator, a microwave, and a coffee maker.

7. Residence Inn by Marriott Long Island Holtsville

Holtsville

Carly

HK$1,061

HK$1,212 total

includes taxes & fees

12 Oct - 13 Oct

A hotel lobby with a reception desk, a blue sofa, a flat-screen TV, and a fireplace.

A hotel room with a large bed, bedside lamps, a desk with a computer, and a chair.

A large, carpeted conference room with a high ceiling and recessed lighting.

A hotel with a covered entrance, a parking lot, and a clear sky.

8. Comfort Inn Medford - Long Island

Medford

Jody

HK$905

HK$1,033 total

includes taxes & fees

1 Nov - 2 Nov

A modern kitchen with white brick backsplash, wooden cabinets, and a central island with appliances. There are two dining areas with tables and chairs.

A hotel room with two beds, a desk, a chair, a TV, and a window with curtains.

A swimming pool with a lifeguard chair, lounge chairs, and a window with a view of greenery.

A spacious hotel lobby with a modern design, featuring a leather sofa, a wooden chair, and a dining area with a large table and chairs.

9. Fairfield Inn by Marriott Medford Long Island

Medford

Carl

HK$946

HK$1,081 total

includes taxes & fees

12 Oct - 13 Oct

An indoor swimming pool with clear blue water, surrounded by lounge chairs and tables.

A modern office space with a desk, computer, and chair.

A courtyard with outdoor seating, a barbecue grill, and a pool table.

A hotel entrance with a flag, a covered walkway, and a sign for Homewood Suites Hilton.

10. Homewood Suites by Hilton Ronkonkoma

Ronkonkoma

Lisa

HK$1,216

HK$1,390 total

includes taxes & fees

1 Nov - 2 Nov

An outdoor patio area with seating, a fire pit, and tables and chairs.

A modern kitchen area with a self-serve beverage station, a microwave, and various storage cabinets.

A hotel reception area with a modern design, including a reception desk, a digital payment terminal, a minibar, and a self-service beverage station.

A multi-story hotel with a prominent "HOME 2" sign, indicating it is part of the Hilton hotel chain.

11. Home2 Suites by Hilton Long Island Brookhaven

Yaphank

Amanda

HK$1,121

HK$1,280 total

includes taxes & fees

18 Oct - 19 Oct

A large, multi-story hotel with a prominent tower and a covered entrance.

A hotel room with a bed, a sofa, a small table, a chair, a kitchenette, and a large window with curtains.

A modern hotel lobby with a sectional sofa, dining area, and a bar.

A spacious lobby with a reception desk, seating area, and a large window providing natural light.

12. Courtyard by Marriott Long Island MacArthur Airport

Ronkonkoma

Kristen

HK$1,248

HK$1,425 total

includes taxes & fees

14 Oct - 15 Oct

An indoor swimming pool with sunlit areas, lounge chairs, and potted plants.

A spacious lobby with a modern design, featuring a mix of seating areas, a reception desk, and large windows offering views.

A reception area with a dark wood reception desk, two laptops, a vase with white flowers, and a glass table.

A hallway with a high ceiling, large windows, and a patterned carpet.

13. Hyatt Regency Long Island

Hauppauge

Leonardo

HK$1,127

HK$1,288 total

includes taxes & fees

12 Oct - 13 Oct

A hotel with a prominent sign, a covered entrance, and a car parked in front.

A hotel reception area with a wooden reception desk, a framed artwork above the counter, and a potted plant on the counter.

A hotel lobby with a reception desk, seating area with armchairs and sofas, patterned carpet, and ambient lighting.

A spacious restaurant with multiple dining tables and chairs, a kitchen area, and a large window.

14. La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

Bohemia

darrell

HK$647

HK$739 total

includes taxes & fees

1 Nov - 2 Nov

An indoor swimming pool with clear glass walls, a tiled floor, and a few chairs near the windows.

A modern hotel lobby with a 'welcome' sign, comfortable seating areas, and a flat-screen TV mounted on the wall.

A hotel room with a large bed, a desk with a computer, a flat-screen TV, and a window with a view of greenery.

A modern office space with a large flat-screen TV, a desk with a chair, a microwave, and a small plant.

15. Hampton Inn Long Island/Islandia

Islandia

Jeronda

HK$772

HK$882 total

includes taxes & fees

1 Nov - 2 Nov

A modern building entrance with a bench, potted plants, and a blue mat leading to a reception area.

A hotel room with a large bed, a desk with a chair, a desk lamp, and a bedside table with a phone.

A spacious lobby with a reception desk, seating area, and a staircase leading to upper floors.

A modern hotel room with a blue sofa, a wooden desk, a chair, a lamp, and a television.

16. Holiday Inn Express Hauppauge-Long Island

Hauppauge

Deniese

HK$1,127

HK$1,288 total

includes taxes & fees

4 Oct - 5 Oct

A spacious living room with a fireplace, large windows, and a modern chandelier.

A store named 'The Shop' with a variety of chilled beverages, snacks, and dairy products.

An outdoor patio area with brick flooring, round tables, chairs, and large umbrellas.

A modern kitchen with a bar area, marble countertops, and dark wooden cabinets.

17. Hilton Garden Inn Islip/MacArthur Airport

Ronkonkoma

Elizabeth

HK$994

HK$1,136 total

includes taxes & fees

1 Nov - 2 Nov

A couple in white bathrobes holding champagne glasses in a hotel room with a large window and a door in the background.

A spacious atrium with high ceilings, a glass ceiling, and multiple levels of balconies.

A spacious lobby with a high ceiling, a glass atrium, and a staircase leading to upper floors.

A spacious atrium with high ceilings, large windows, and a modern architectural design.

18. Jake's 58 Casino Hotel - Adult Only

Islandia

WILLIAM

HK$1,074

HK$1,227 total

includes taxes & fees

4 Oct - 5 Oct

A group of people toasting with wine glasses at a table.

A hotel room with a bed, a sofa, a dining table with chairs, a TV, and a fireplace.

An indoor swimming pool with clear water, surrounded by red and white tiled walls, and equipped with sun loungers and potted plants.

A hotel room with a bed, desk, chair, sofa, and a TV.

19. Residence Inn By Marriott Long Island Hauppauge

Hauppauge

Debra

HK$1,193

HK$1,390 total

includes taxes & fees

12 Oct - 13 Oct

An outdoor patio area with a stone fire pit surrounded by sofas and chairs, string lights overhead, and a view of a multi-story building in the background.

A spacious lobby with a stone pillar, a flat-screen TV, comfortable seating, and large windows offering a view of the outdoors.

A large indoor swimming pool with clear blue water, surrounded by lounge chairs and tables, with a high ceiling and large windows.

20. Residence Inn Long Island Islip/Courthouse Complex

Central Islip

Meghan

HK$1,166

HK$1,332 total

includes taxes & fees

7 Oct - 8 Oct

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Stay near popular Port Jefferson attractions

Wooden posts in calm water with a cloudy sky.

Harborfront Park

9.4/10 (33 reviews)

Stroll along the waterfront promenade at Harborfront Park for spectacular views of Port Jefferson Harbour. The 350-foot pier and aquatic-themed playground create a perfect setting for family relaxation.

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White Beach

9.4/10 (8 reviews)

White Beach offers a serene escape along the Long Island Sound with its tranquil shoreline and picturesque views. Bring a picnic and your own amenities to fully enjoy this peaceful local treasure.

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A red curtain with a striped trim on a wooden floor.

Theatre Three

9.4/10 (9 reviews)

This intimate Port Jefferson theatre presents classic plays and contemporary works in a historic setting. Enjoy their renowned holiday production of "A Christmas Carol" or catch a children's theatre performance.

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Mather House Museum

8.4/10 (6 reviews)

This 19th-century maritime museum preserves Port Jefferson's shipbuilding heritage in the former Mather family home. Explore period rooms, a harbour diorama, and nautical artefacts across multiple historic buildings.

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Maritime Explorium

9.0/10 (7 reviews)

This interactive children's museum transforms STEM learning into maritime adventures in Port Jefferson. Kids engage with hands-on exhibits, building model boats and exploring ocean science in an educational setting.

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Learn more about Port Jefferson

Stroll along the charming harborfront park, soaking in views of bobbing boats and waterfront eateries. Locals affectionately call this historic village 'Port Jeff,' where you'll find friendly faces and mouthwatering seafood around every corner.

See all hotels in Port Jefferson

Top Port Jefferson Hotel Reviews

Motel 6 Milford, CT

8/10 Good

"The room was clean and bed was comfortable with good assortment of pillows"

Jake's 58 Casino Hotel - Adult Only

8/10 Good

"Only one elevator for so many people that is constantly going up and down."

Courtyard by Marriott Long Island Islip/Courthouse Complex

8/10 Good

"all good"

Clarion Hotel & Conference Center Ronkonkoma MacArthur Airport

10/10 Excellent

"The hotel is ok but the plane noises its terrible since windows are not equipped for so nearby airports."

Red Roof Inn Milford - New Haven

8/10 Good

"It was clean and nice"

More cheap stays in Port Jefferson

Motel 6 Milford, CT

111 Schoolhouse Road Milford CT

HK$549

HK$632 total

1 Nov - 2 Nov

includes taxes & fees

6.6/10 (1,048 reviews)

Red Roof Inn Milford - New Haven

10 Rowe Ave Milford CT

HK$667

HK$767 total

13 Oct - 14 Oct

includes taxes & fees

Greenview Inn Riverhead

1433 W Main St Riverhead NY

HK$903

HK$1,031 total

1 Nov - 2 Nov

includes taxes & fees

7.4/10 Good! (883 reviews)

Comfort Inn Medford - Long Island

2695 Route 112 Medford NY

HK$905

HK$1,033 total

1 Nov - 2 Nov

includes taxes & fees

Holiday Inn Express Stony Brook by IHG

3131 Nesconset Hwy Centereach NY

HK$961

HK$1,097 total

26 Oct - 27 Oct

includes taxes & fees

9/10 Wonderful! (1,007 reviews)

Holiday Inn Express Hauppauge-Long Island

2050 Express Dr S Hauppauge NY

HK$1,127

HK$1,288 total

4 Oct - 5 Oct

includes taxes & fees

Hotels in Port Jefferson with star-rating

Frequently asked questions

What's the best place to stay in Port Jefferson?

Danfords Hotel and Marina is one of the top choices for your stay based on our traveller data. This hotel offers a marina and a restaurant. Other good choices for your stay in the area are Radisson Hotel Hauppauge-Long Island and Holiday Inn Express Hauppauge-Long Island. See all available top hotels, or vacation rentals in Port Jefferson.

What are some of the best holiday rentals that Port Jefferson has to offer?

11-Bedroom Mansion with a Seasonal Outdoor Pool open now plus 10.5 bathrooms: This holiday home rental outside of Port Jefferson is located on the waterfront, and has an outdoor pool, a fireplace and a BBQ to put you at ease in your new surroundings. It has 11 bedrooms, as well as a kitchen with a dishwasher, a fridge and a stovetop, so that you can cook with friends or family. It offers a balcony, a garden and a selection of games so that you can immerse yourself in your holiday. See all vacation rentals in Port Jefferson.

If I need to cancel my hotel reservation in Port Jefferson, will I receive a refund?

Yes, most hotel bookings are fully refundable provided that you cancel before the accommodation's cancellation deadline, which is often 24 or 48 hours before the scheduled arrival. If you have a reservation that's non-refundable, it might still be possible to cancel it and be given a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Port Jefferson.

What are some accommodation options with pools in Port Jefferson?

Radisson Hotel Hauppauge-Long Island: Offers a snack bar/deli, an indoor pool and complimentary high-speed (wired) Internet access. Holiday Inn Express Hauppauge-Long Island and Hampton Inn Long Island-Brookhaven are a couple of other choices with an on-site pool. View all hotels with pools in Port Jefferson.

What is the best spa hotel in Port Jefferson?

Danfords Hotel and Marina is a top spa hotel featuring a bar and a restaurant. Enjoy a massage at the on-site spa. See all spa hotels in Port Jefferson.

How is it to stay in Port Jefferson?

Visitors to Port Jefferson will definitely enjoy the port and restaurants. Tourists can also enjoy the city's entertainment choices, festivals and live music. In Port Jefferson, there are 7 hotels and other accommodation options to choose from. Find out more about Port Jefferson.

What should I see while I'm in Port Jefferson?

Cultural venues include Maritime Explorium, Mather House Museum and Theatre Three. Exploring the port is a great activity, and Port Jefferson is one place to visit. A couple of additional sights to add to your itinerary are Harborfront Park and Cedar Hill Cemetery. Take a look at what more there is to see and do in Expedia's Port Jefferson guide.

What's the seasonal weather like in Port Jefferson?

The hottest months are usually July and August, with an average temperature of 22°C, while the coldest months are January and February, with an average of 3°C. Average annual precipitation for Port Jefferson is 1404 mm.

Port Jefferson hotels from HK$632

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Port Jefferson

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Port Jefferson hotels

1. Danfords Hotel and Marina

2. Hilton Garden Inn Stony Brook

3. Holiday Inn Express Stony Brook by IHG

4. Americas Best Value Inn Port Jefferson Station Long Island

5. Hampton Inn Long Island-Brookhaven

6. Holiday Inn Long Island-Islip Arpt East by IHG

7. Residence Inn by Marriott Long Island Holtsville

8. Comfort Inn Medford - Long Island

9. Fairfield Inn by Marriott Medford Long Island

10. Homewood Suites by Hilton Ronkonkoma

11. Home2 Suites by Hilton Long Island Brookhaven

12. Courtyard by Marriott Long Island MacArthur Airport

13. Hyatt Regency Long Island

14. La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

15. Hampton Inn Long Island/Islandia

16. Holiday Inn Express Hauppauge-Long Island

17. Hilton Garden Inn Islip/MacArthur Airport

18. Jake's 58 Casino Hotel - Adult Only

19. Residence Inn By Marriott Long Island Hauppauge

20. Residence Inn Long Island Islip/Courthouse Complex

Stay near popular Port Jefferson attractions

Harborfront Park

White Beach

Theatre Three

Mather House Museum

Maritime Explorium

Learn more about Port Jefferson

Top Port Jefferson Hotel Reviews

Motel 6 Milford, CT

Jake's 58 Casino Hotel - Adult Only

Courtyard by Marriott Long Island Islip/Courthouse Complex

Clarion Hotel & Conference Center Ronkonkoma MacArthur Airport

Red Roof Inn Milford - New Haven

More cheap stays in Port Jefferson

Motel 6 Milford, CT

Red Roof Inn Milford - New Haven

Greenview Inn Riverhead

Comfort Inn Medford - Long Island

Holiday Inn Express Stony Brook by IHG

Holiday Inn Express Hauppauge-Long Island

Hotels in Port Jefferson with star-rating

Frequently asked questions

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