A lighthouse on a rocky coastline with the ocean in the foreground.

Search Apartments in San Juan Islands

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
In two months
In three months
In four months

Our top choices for San Juan Islands apartments

1. Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach

Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach
Eastsound
9.2 out of 10, Wonderful, (76 reviews)
"Peaceful and quiet spot in the woods yet near the Ferry and Lake Killebrew! The owners art is on display. Another wonderful relaxing stay for this return customer."
United States
Joshua F.
The price is HK$1,090
HK$2,453 total
includes taxes & fees
5 Oct - 6 Oct
Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach

2. Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

Madrona Suite - Summer on Orcas Island- rest where sea meets stillness
Eastsound
10.0 out of 10, Exceptional, (28 reviews)
"My husband and I had a lovely stay. The property is beautiful and quiet. Jodi was communicative and accommodating."
United States
Heather H.
The price is HK$2,078
HK$3,174 total
includes taxes & fees
5 Oct - 6 Oct
Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

3. Heart of Deer Harbor - Harbormaster House

Heart of Deer Harbor - Harbormaster House
Deer Harbor
10.0 out of 10, Exceptional, (4 reviews)
"Loved the house! Beautiful view, nicely decorated, very comfortable. Will definitely stay here again!"
United States
Cndi B.
The price is HK$3,252
HK$6,233 total
includes taxes & fees
20 Sept - 21 Sept
Heart of Deer Harbor - Harbormaster House

4. Sunny Island Cliff Side Views

Sunny Island Cliff Side Views
Anacortes
9.8 out of 10, Exceptional, (56 reviews)
"Absolutely lovely"
United States
Taryn H.
The price is HK$1,341
HK$2,353 total
includes taxes & fees
15 Sept - 16 Sept
Sunny Island Cliff Side Views

5. Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!
Anacortes
10.0 out of 10, Exceptional, (37 reviews)
"Was perfect for our pre-ferry evening. Thank you!"
United States
Shawna
The price is HK$941
HK$1,199 total
includes taxes & fees
27 Sept - 28 Sept
Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

6. Sea View Inn Summary:

Sea View Inn Summary:
Anacortes
9.2 out of 10, Wonderful, (47 reviews)
"The hosts were very welcoming and accommodating. The space was perfect for our family and pets. The view was incredible. "
United States
Pamela W.
The price is HK$1,247
HK$2,178 total
includes taxes & fees
14 Sept - 15 Sept
Sea View Inn Summary:

7. 900 square foot Studio loft in Fairhaven

900 square foot Studio loft in Fairhaven
South Bellingham
10.0 out of 10, Exceptional, (80 reviews)
"Lovely, comfortable and well appointed property. Hope to be back."
United States
Lori
The price is HK$1,043
HK$2,283 total
includes taxes & fees
15 Sept - 16 Sept
900 square foot Studio loft in Fairhaven

8. The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive

The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive
Bellingham
10.0 out of 10, Exceptional, (29 reviews)
"Charming property, comfy, clean and well appointed."
United States
Sara M.
The price is HK$1,411
HK$2,243 total
includes taxes & fees
17 Sept - 18 Sept
The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive

9. Full Apt with large kitchen across the street from the beach.

Full Apt with large kitchen across the street from the beach.
Blaine
10.0 out of 10, Exceptional, (3 reviews)
"This is a very comfortable apartment with an amazingly stocked kitchen. Everything we needed was there. It is steps from the bay, and a quick walk to the state park. I would definitely stay here again!"
United States
Carla G.
The price is HK$580
HK$1,875 total
includes taxes & fees
13 Sept - 14 Sept
Full Apt with large kitchen across the street from the beach.

10. Downtown Bellingham Apartment

Downtown Bellingham Apartment
Lettered Streets
10.0 out of 10, Exceptional, (84 reviews)
"The apartment was very nice. Exceptionally clean and the beds were very comfortable. Nice coffee and tea station in the apartment and snacks were provided. The owners really think of everything that might be needed by guests."
United States
Ann
The price is HK$863
HK$1,465 total
includes taxes & fees
1 Oct - 2 Oct
Downtown Bellingham Apartment

11. Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA

Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA
Ferndale
8.8 out of 10, Excellent, (5 reviews)
"Cameron was super friendly and accommodating. The place was just what we needed for one night. It was private and well taken care of. Looking forward to coming back. "
United States
Josefine V.
The price is HK$627
HK$1,026 total
includes taxes & fees
16 Sept - 17 Sept
Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA

12. Downstairs@TheVictorian: Downtown and Dog-Friendly

Downstairs@TheVictorian: Downtown and Dog-Friendly
York
10.0 out of 10, Exceptional, (28 reviews)
"Great location, cute yard, and a very nice kitchen :)"
United States
David K.
The price is HK$1,161
HK$2,577 total
includes taxes & fees
24 Sept - 25 Sept
Downstairs@TheVictorian: Downtown and Dog-Friendly

13. Creekside Studio- right across from the Beach.

Creekside Studio- right across from the Beach.
Birch Bay
9.4 out of 10, Exceptional, (20 reviews)
"The place was in tip top new condition. We enjoyed the nearby town of Blaine and the restaurants there. Took day trips to Mt Baker, Vancouver, and Friday Harbor in the San Juan Islands."
United States
James
The price is HK$823
HK$2,193 total
includes taxes & fees
30 Sept - 1 Oct
Creekside Studio- right across from the Beach.

14. Studio with covered deck and Birch Bay View

Studio with covered deck and Birch Bay View
Blaine
7.6 out of 10, Good, (4 reviews)
"Great weather and great locatio6"
United States
michael c.
Studio with covered deck and Birch Bay View

15. Sunny Queen Bed Room|Pool|Free Wifi

Sunny Queen Bed Room|Pool|Free Wifi
Sehome
The price is HK$636
HK$734 total
includes taxes & fees
1 Oct - 2 Oct
Sunny Queen Bed Room|Pool|Free Wifi

16. Spacious 2-bed Room|Pool|Free Wifi

Spacious 2-bed Room|Pool|Free Wifi
Sehome
The price is HK$706
HK$812 total
includes taxes & fees
23 Sept - 24 Sept
Spacious 2-bed Room|Pool|Free Wifi

17. Welcome to Tranquility Place, Whidbey Island

Welcome to Tranquility Place, Whidbey Island
Oak Harbor
9.8 out of 10, Exceptional, (14 reviews)
"We had a great stay! The bathroom is really nice and the view from the bed was lovely."
United States
Kerry K.
The price is HK$870
HK$1,429 total
includes taxes & fees
7 Oct - 8 Oct
Welcome to Tranquility Place, Whidbey Island

18. Galbraith Mountain Forest Escape

Galbraith Mountain Forest Escape
Bellingham
10.0 out of 10, Exceptional, (22 reviews)
"Great experience!! We felt very taken care of and glad to stay. We will stay again next time."
United States
Eric F.
The price is HK$1,898
HK$3,849 total
includes taxes & fees
23 Sept - 24 Sept
Galbraith Mountain Forest Escape

19. Luxury Maple Beach Waterfront King apartment-Ground Floor only 50 feet to Beach.

Luxury Maple Beach Waterfront King apartment-Ground Floor only 50 feet to Beach.
Point Roberts
10.0 out of 10, Exceptional, (13 reviews)
The price is HK$1,255
HK$1,556 total
includes taxes & fees
1 Oct - 2 Oct
Luxury Maple Beach Waterfront King apartment-Ground Floor only 50 feet to Beach.

20. Upstairs at Thevictorian - Lush Walkable and Dog-friendly Retreat - Steps From Downtown Bellingham

Upstairs at Thevictorian - Lush Walkable and Dog-friendly Retreat - Steps From Downtown Bellingham
2.0 star property
York
10.0 out of 10, Exceptional, (1 review)
"Spotless"
United States
Henry
The price is HK$1,587
HK$2,691 total
includes taxes & fees
6 Oct - 7 Oct
Upstairs at Thevictorian - Lush Walkable and Dog-friendly Retreat - Steps From Downtown Bellingham
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Top San Juan Islands Hotel Reviews

Find out more about San Juan Islands

San Juan Islands Apartments information

Number of reviews
547
Accommodation
36 Apartments
Lowest Price
HK$1,026
Highest Price
HK$6,233

Explore a world of travel with Expedia