Best Brookhaven Hotels in 2026 from HK$639 - Fully Refundable Options

A calm lake with a sailboat, surrounded by autumn-colored trees and a cloudy sky.

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Go beyond your typical stay in Brookhaven

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Our top choices for Brookhaven hotels

1. Home2 Suites by Hilton Long Island Brookhaven

Yaphank

Shelley

HK$1,140

HK$1,303 total

includes taxes & fees

5 Oct - 6 Oct

2. Hampton Inn Long Island-Brookhaven

Farmingville

Randall

HK$958

HK$1,094 total

includes taxes & fees

30 Sept - 1 Oct

3. Holiday Inn Long Island-Islip Arpt East by IHG

Holtsville

Nicholas

HK$926

HK$1,057 total

includes taxes & fees

4 Oct - 5 Oct

4. Fairfield Inn by Marriott Medford Long Island

Medford

Carl

HK$946

HK$1,081 total

includes taxes & fees

5 Oct - 6 Oct

5. Comfort Inn Medford - Long Island

Medford

Daisy

HK$835

HK$954 total

includes taxes & fees

4 Oct - 5 Oct

6. Residence Inn by Marriott Long Island Holtsville

Holtsville

Tara

HK$1,060

HK$1,211 total

includes taxes & fees

28 Sept - 29 Sept

7. Holiday Inn Express Stony Brook by IHG

Centereach

Wade

HK$960

HK$1,097 total

includes taxes & fees

20 Sept - 21 Sept

8. Homewood Suites by Hilton Ronkonkoma

Ronkonkoma

Lisa

HK$1,216

HK$1,389 total

includes taxes & fees

28 Sept - 29 Sept

9. Bellport Inn

Bellport

Alex

HK$2,700

HK$3,085 total

includes taxes & fees

21 Sept - 22 Sept

10. Courtyard by Marriott Long Island MacArthur Airport

Ronkonkoma

MD Ekrim

HK$1,247

HK$1,425 total

includes taxes & fees

28 Sept - 29 Sept

11. La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

Bohemia

Andrea

HK$722

HK$824 total

includes taxes & fees

5 Oct - 6 Oct

12. Midway Motel

Patchogue

Clint

HK$1,569

HK$1,792 total

includes taxes & fees

21 Sept - 22 Sept

13. 112 Motel

Medford

HK$961

HK$1,098 total

includes taxes & fees

8 Oct - 9 Oct

14. Hilton Garden Inn Stony Brook

Stony Brook

Kimberly

HK$1,127

HK$1,287 total

includes taxes & fees

5 Oct - 6 Oct

15. Hyatt Regency Long Island

Hauppauge

Lisa

HK$1,127

HK$1,287 total

includes taxes & fees

4 Oct - 5 Oct

16. Residence Inn Long Island Islip/Courthouse Complex

Central Islip

Sareka

HK$1,165

HK$1,331 total

includes taxes & fees

21 Sept - 22 Sept

17. Holiday Inn Express Hauppauge-Long Island

Hauppauge

emmanuel

HK$1,023

HK$1,169 total

includes taxes & fees

20 Sept - 21 Sept

18. Hampton Inn Long Island/Islandia

Islandia

HK$974

HK$1,113 total

includes taxes & fees

7 Oct - 8 Oct

19. The Inn And Spa At East Wind

Calverton

Kristine

HK$1,053

HK$1,203 total

includes taxes & fees

21 Sept - 22 Sept

20. Courtyard by Marriott Long Island Islip/Courthouse Complex

Central Islip

DAVID

HK$1,129

HK$1,290 total

includes taxes & fees

28 Sept - 29 Sept

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Stay near popular Brookhaven attractions

beach near Bellport Bay State Tidal Wetland

Why not spend a lazy afternoon at beach near Bellport Bay State Tidal Wetland during your trip to Brookhaven? Experience the area's festivals and entertainment choices.

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Learn more about Brookhaven

Explore the scenic trails of Wertheim National Wildlife Refuge where migratory birds create a paradise for photographers and nature lovers. Families flock to Smith Point Beach for summer swimming, while history buffs can discover Long Island's past at the Longwood Estate's historic grounds.

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Top Brookhaven Hotel Reviews

Hampton Inn Long Island-Brookhaven

8/10 Good

"Modern hotel, well maintained. Large, heated indoor pool was good for relaxing or doing laps. Breakfast was good and always refilled. They charged us twice for parking fee ($15/night) but said they would reverse the duplicate charge (still haven't seen the credit on card though). Make sure you review your bill before leaving."

Greenview Inn Riverhead

8/10 Good

"The lake with the swans"

Budget Host East End

10/10 Excellent

"Excelente"

Clarion Hotel & Conference Center Ronkonkoma MacArthur Airport

10/10 Excellent

"Great location"

Danfords Hotel and Marina

10/10 Excellent

"Love where is located. Very peaceful and calm"

Holiday Inn Express Stony Brook by IHG

8/10 Good

"Have to update the outlet for the new iPhones. All the chargers have the USB plug."

Hampton Inn Long Island/Islandia

10/10 Excellent

"Good"

More cheap stays in Brookhaven