Harbor Island hotels in San Diego

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Our top choices for Harbor Island hotels

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
Harbor Island
8.8 out of 10, Excellent, (1225)
"The staff was great, the room was clean and the view was amazing."
United States
Lolita
The price is HK$1,270
HK$1,459 total
includes taxes & fees
29 Dec - 30 Dec
Hilton San Diego Airport/Harbor Island

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
Harbor Island
8.4 out of 10, Very good, (3180)
"Great stay! "
United States
Melissa
The price is HK$827
HK$1,230 total
includes taxes & fees
28 Dec - 29 Dec
Sheraton San Diego Resort

Embassy Suites by Hilton San Diego La Jolla

Embassy Suites by Hilton San Diego La Jolla
4.0 star property
16.6 km from Harbor Island
8.8 out of 10, Excellent, (1783)
"Good hot food!!"
United States
Cris
The price is HK$1,436
HK$1,650 total
includes taxes & fees
4 Jan - 5 Jan 2026
Embassy Suites by Hilton San Diego La Jolla

Inn By The Sea La Jolla

Inn By The Sea La Jolla
3.5 star property
14.8 km from Harbor Island
9.4 out of 10, Exceptional, (1747)
"Delightful stay. Perfect location. "
United States
Nicole
The price is HK$1,240
HK$1,425 total
includes taxes & fees
23 Dec - 24 Dec
Inn By The Sea La Jolla

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach
2.5 star property
Pacific Beach, 8.5 km from Harbor Island
9.0 out of 10, Wonderful, (809)
"Good location, good basic breakfast, good parking, recommended. "
United States
Leyla
The price is HK$801
HK$921 total
includes taxes & fees
30 Dec - 31 Dec
Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
0.7 km from Harbor Island
9.2 out of 10, Wonderful, (1707)
"Excellent place "
Mexico
Rafael
The price is HK$1,184
HK$1,360 total
includes taxes & fees
29 Dec - 30 Dec
Hampton Inn & Suites San Diego Airport Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
1 km from Harbor Island
9.4 out of 10, Exceptional, (1362)
"Great place to stay at!"
United States
Sandy
The price is HK$1,231
HK$1,415 total
includes taxes & fees
4 Jan - 5 Jan 2026
Homewood Suites by Hilton San Diego Airport/Liberty Station

Hampton Inn San Diego-Kearny Mesa

Hampton Inn San Diego-Kearny Mesa
2.5 star property
13.4 km from Harbor Island
9.0 out of 10, Wonderful, (1001)
"It was a very nice stay "
United States
Douglas
The price is HK$890
HK$1,022 total
includes taxes & fees
18 Jan - 19 Jan 2026
Hampton Inn San Diego-Kearny Mesa

Hampton Inn & Suites by Hilton San Diego SeaWorld

Hampton Inn & Suites by Hilton San Diego SeaWorld
3.0 star property
3.4 km from Harbor Island
9.2 out of 10, Wonderful, (433)
"Clean rooms, friendly staff."
United States
KARLA
The price is HK$787
HK$905 total
includes taxes & fees
4 Jan - 5 Jan 2026
Hampton Inn & Suites by Hilton San Diego SeaWorld

Empress Hotel of La Jolla

Empress Hotel of La Jolla
3.0 star property
14.7 km from Harbor Island
9.0 out of 10, Wonderful, (1001)
"Love staying here. It is very convenient to everywhere we need to go in the heart of La Jolla. The staff is friendly and the restaurant is the best!"
United States
Sharon
The price is HK$1,256
HK$1,578 total
includes taxes & fees
30 Dec - 31 Dec
Empress Hotel of La Jolla

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 6.4 km from Harbor Island
8.6 out of 10, Excellent, (1820)
"Friendly staff and beautiful property "
United States
Cherron
The price is HK$985
HK$1,566 total
includes taxes & fees
4 Jan - 5 Jan 2026
Bahia Resort Hotel

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay, 6.3 km from Harbor Island
8.6 out of 10, Excellent, (2357)
"Great stay, top tier service and excellent customer care "
Canada
Meriem
The price is HK$1,006
HK$1,569 total
includes taxes & fees
11 Jan - 12 Jan 2026
Paradise Point Resort & Spa

Grande Colonial Hotel

Grande Colonial Hotel
4.0 star property
15 km from Harbor Island
9.4 out of 10, Exceptional, (1000)
"Great location,excellent restaurant downstairs. Nice rooms. Excellent architecture."
United States
daniel
The price is HK$1,647
HK$2,296 total
includes taxes & fees
23 Dec - 24 Dec
Grande Colonial Hotel

Catamaran Resort and Spa

Catamaran Resort and Spa
4.0 star property
Mission Beach, 8.4 km from Harbor Island
8.6 out of 10, Excellent, (1112)
"Great place to vacation. "
United States
Manuel
The price is HK$1,184
HK$1,776 total
includes taxes & fees
29 Dec - 30 Dec
Catamaran Resort and Spa

The Inn at Sunset Cliffs

The Inn at Sunset Cliffs
2.5 star property
Ocean Beach, 4.7 km from Harbor Island
9.2 out of 10, Wonderful, (1006)
"Great place beautiful view "
United States
Josue
The price is HK$1,525
HK$1,720 total
includes taxes & fees
24 Dec - 25 Dec
The Inn at Sunset Cliffs

Lafayette Hotel & Club

Lafayette Hotel & Club
4.0 star property
7 km from Harbor Island
9.4 out of 10, Exceptional, (1347)
"Enjoyable an"
United States
Barry
The price is HK$1,782
HK$2,045 total
includes taxes & fees
5 Jan - 6 Jan 2026
Lafayette Hotel & Club

Hilton San Diego Bayfront

Hilton San Diego Bayfront
4.0 star property
Marina District, 5 km from Harbor Island
8.6 out of 10, Excellent, (1886)
"Enjoyed my stay"
United States
Brandon
The price is HK$922
HK$1,450 total
includes taxes & fees
4 Jan - 5 Jan 2026
Hilton San Diego Bayfront

Courtyard by Marriott San Diego Downtown Little Italy

Courtyard by Marriott San Diego Downtown Little Italy
4.0 star property
Little Italy, 3.9 km from Harbor Island
9.0 out of 10, Wonderful, (130)
"It was a nice place to stay at"
United States
Eric
The price is HK$1,019
HK$1,181 total
includes taxes & fees
30 Dec - 31 Dec
Courtyard by Marriott San Diego Downtown Little Italy

La Quinta Inn & Suites by Wyndham San Diego Mission Bay

La Quinta Inn & Suites by Wyndham San Diego Mission Bay
3.0 star property
North Pacific Beach, 9.2 km from Harbor Island
8.0 out of 10, Very good, (1436)
"Great place We will stay here again. "
United States
Derek
The price is HK$712
HK$819 total
includes taxes & fees
7 Jan - 8 Jan 2026
La Quinta Inn & Suites by Wyndham San Diego Mission Bay

Manchester Grand Hyatt San Diego

Manchester Grand Hyatt San Diego
4.0 star property
Marina District, 3.9 km from Harbor Island
9.0 out of 10, Wonderful, (2881)
"Lovely hotel with friendly staff."
United States
Lynnea
The price is HK$1,175
HK$1,786 total
includes taxes & fees
23 Dec - 24 Dec
Manchester Grand Hyatt San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Harbor Island

Find the best Harbor Island areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Gaslamp Quarter

San Diego’s historic heart has shed its seedy past to emerge as one of the city’s premier dining, shopping and entertainment hubs.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission and Pacific Beaches are top sights worth seeing.

Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Dog Beach and Sunset Cliffs Natural Park.

Top Harbor Island Hotel Reviews

Frequently asked questions

What's it like in Harbor Island?
Harbor Island is a scenic neighbourhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.
Where is the best place to stay in Harbor Island?
Based on Expedia customer reviews, Hilton San Diego Airport/Harbor Island is the highest ranked property in Harbor Island. This hotel is a short 5-minute walk from Naval Base Coronado, and it offers a restaurant and an outdoor pool. Another top choice in the area is Sheraton San Diego Resort.
How many hotels should I expect to find in the Harbor Island area?
Book one of Expedia's 6 hotels and other accommodation options in Harbor Island and start exploring everything San Diego has to offer.
If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?
Yes, the majority of hotel reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and get a refund within 24 hours of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to view the top deals on offer in Harbor Island.
What is there to do around this San Diego neighbourhood?
San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, make sure that you visit other sights such as Port of San Diego or Hotel Circle.

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